Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012404.1 Corchorus olitorius cultivar O-4 contig12437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8058

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3014--3086
28
2.4
29
84
13
85
20
41
32
5
1.75
3148--3180
12
2.8
12
82
17
50
75
0
0
24
0.80
3182--3223
17
2.4
18
84
4
50
78
0
21
0
0.75
3201--3234
12
2.8
12
86
0
50
67
0
32
0
0.91
7895--7949
12
4.8
12
71
8
51
18
43
36
1
1.61
7881--7960
34
2.4
34
97
0
151
16
45
35
3
1.65

Tables:   1

The End!