Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012405.1 Corchorus olitorius cultivar O-4 contig12438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12133

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
737--926
93
2.0
93
90
0
299
51
2
12
34
1.52
817--873
22
2.5
22
80
8
62
61
1
12
24
1.40
960--1021
31
2.0
31
87
0
88
45
6
19
29
1.75
1291--1326
19
1.9
18
88
5
54
41
8
22
27
1.82
1279--1338
30
2.0
30
83
6
77
41
8
18
31
1.80
2602--2644
22
2.0
22
85
0
59
18
9
9
62
1.51
2821--2853
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!