Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012409.1 Corchorus olitorius cultivar O-4 contig12442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17163

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
798--879
20
4.2
19
74
18
71
79
1
13
6
0.98
795--880
7
12.3
7
72
13
70
79
1
13
5
0.98
807--880
20
3.7
20
76
18
73
79
1
12
6
0.98
8415--8465
25
2.0
25
88
0
75
49
19
3
27
1.66
11926--11999
36
2.1
36
92
0
121
56
14
8
20
1.63
12196--12233
11
3.5
11
89
10
60
55
2
0
42
1.14

Tables:   1

The End!