Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012410.1 Corchorus olitorius cultivar O-4 contig12443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25710

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
849--1188
177
1.9
178
86
3
479
35
15
14
33
1.88
2386--2434
24
2.1
24
96
3
91
73
2
8
16
1.16
3111--3135
11
2.3
11
100
0
50
68
8
16
8
1.38
6190--6218
2
14.5
2
100
0
58
51
0
0
48
1.00
6195--6451
128
2.0
129
93
1
437
40
12
7
39
1.70
6464--6498
2
18.0
2
94
5
63
51
0
0
48
1.00
17651--17717
33
2.0
33
94
0
116
22
14
8
53
1.69
20512--20564
16
3.3
16
75
15
56
9
5
3
81
0.98
21694--21742
21
2.3
20
80
10
53
42
16
26
14
1.86

Tables:   1

The End!