Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012415.1 Corchorus olitorius cultivar O-4 contig12448, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34618

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6563--6595
6
5.5
6
100
0
66
51
0
33
15
1.43
19248--19328
21
3.9
21
93
0
135
30
24
8
35
1.86
24101--24149
14
3.4
15
80
8
57
0
22
0
77
0.77
24100--24141
10
4.4
10
85
8
61
0
19
0
80
0.70
25661--25926
133
2.0
133
98
0
514
24
13
22
39
1.90
31621--31655
13
2.8
12
91
8
61
40
8
0
51
1.33
33655--33757
3
33.7
3
85
3
125
60
1
1
35
1.19

Tables:   1

The End!