Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012416.1 Corchorus olitorius cultivar O-4 contig12449, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35451

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--78
2
36.5
2
100
0
146
0
49
0
50
1.00
547--578
14
2.1
16
88
11
50
68
0
25
6
1.12
756--838
41
2.0
41
90
4
132
40
16
13
28
1.86
2463--2524
30
2.1
30
100
0
124
43
4
25
25
1.74
2592--2634
22
2.0
22
85
0
59
4
6
13
74
1.19
4705--4731
13
2.1
13
100
0
54
22
22
22
33
1.97
14069--14117
26
1.9
25
83
4
62
57
6
0
36
1.24
15240--15308
34
2.0
34
97
0
129
60
15
8
14
1.57
24310--24340
16
1.9
16
93
0
53
51
0
16
32
1.44
24846--24939
9
10.7
9
97
2
174
35
53
11
0
1.38
25074--25098
5
5.0
5
100
0
50
40
20
0
40
1.52
30876--30930
27
2.0
27
85
0
74
7
14
36
41
1.74
31523--31627
54
2.0
53
88
1
156
41
20
10
27
1.84

Tables:   1

The End!