Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012419.1 Corchorus olitorius cultivar O-4 contig12452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21720

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
475--502
13
2.2
13
100
0
56
35
0
35
28
1.58
4539--4591
26
2.1
25
89
3
79
5
22
18
52
1.66
4592--4624
2
16.5
2
100
0
66
48
0
0
51
1.00
4744--4775
2
15.5
2
93
6
55
50
3
0
46
1.17
6427--6463
19
1.9
19
94
0
65
16
35
13
35
1.88
12484--12534
22
2.3
22
89
0
75
0
11
13
74
1.07
19486--19538
4
14.0
4
74
18
51
50
22
1
24
1.59
19986--20033
11
4.7
11
80
12
50
39
10
20
29
1.86
21404--21445
15
2.7
15
92
3
66
11
9
14
64
1.50

Tables:   1

The End!