Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012421.1 Corchorus olitorius cultivar O-4 contig12454, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16079

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
838--879
15
2.7
15
92
3
66
64
14
9
11
1.50
3522--3566
18
2.4
18
96
3
81
26
6
13
53
1.64
7174--7215
15
2.7
15
92
3
66
64
14
9
11
1.50
9217--9241
13
1.9
13
100
0
50
32
12
16
40
1.84
13486--13584
8
12.5
8
96
3
175
75
0
12
12
1.04
14343--14389
11
4.3
11
84
10
60
80
0
14
4
0.85
14336--14394
22
2.8
21
85
10
68
76
0
16
6
1.00
15046--15081
19
1.9
18
88
5
54
41
5
22
30
1.76

Tables:   1

The End!