Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012423.1 Corchorus olitorius cultivar O-4 contig12456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12407

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--388
67
2.1
67
90
5
223
43
12
6
37
1.69
248--395
65
2.3
64
88
6
210
43
12
6
38
1.67
499--544
2
23.0
2
91
8
76
47
0
2
50
1.13
1312--1363
17
3.4
17
65
25
51
19
13
3
63
1.44
1305--1363
29
2.0
29
100
0
118
20
13
3
62
1.45
4471--4528
28
2.1
28
100
0
116
25
13
24
36
1.92
5639--5863
114
2.0
114
99
0
441
35
14
16
33
1.89

Tables:   1

The End!