Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012430.1 Corchorus olitorius cultivar O-4 contig12463, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14279

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
292--386
45
2.2
43
87
7
140
40
21
5
33
1.75
1252--2419
610
1.9
610
90
1
1883
41
16
16
24
1.89
5554--5603
21
2.4
21
100
0
100
8
16
20
56
1.65
5662--5689
6
4.7
6
100
0
56
17
14
14
53
1.73
13525--13589
14
4.8
13
83
12
78
44
9
10
35
1.71
14226--14272
2
23.5
2
100
0
94
51
0
48
0
1.00

Tables:   1

The End!