Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012433.1 Corchorus olitorius cultivar O-4 contig12466, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23853

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5892--5940
15
3.3
15
83
11
64
51
2
46
0
1.12
8369--8403
11
3.2
11
83
0
52
77
17
5
0
0.96
8374--8432
16
3.7
16
72
17
50
69
18
10
1
1.25
9980--10044
27
2.4
27
89
0
94
23
1
16
58
1.47
12574--12598
12
2.1
12
100
0
50
40
8
44
8
1.63
16398--16650
131
2.0
128
87
7
374
35
10
3
50
1.53
16636--16674
14
2.9
13
80
3
51
41
2
2
53
1.28
20187--20336
50
2.9
50
79
8
160
52
12
20
14
1.74
22105--22163
22
2.5
24
78
15
61
23
22
5
49
1.70

Tables:   1

The End!