Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012439.1 Corchorus olitorius cultivar O-4 contig12472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11656

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1975--2016
15
2.7
15
85
3
57
14
7
14
64
1.48
2189--2260
29
2.4
29
90
2
117
18
13
36
31
1.90
2393--2432
18
2.2
18
95
0
71
47
10
12
30
1.74
5672--5719
21
2.3
21
92
0
78
16
43
25
14
1.86
6076--6105
15
2.1
14
93
6
51
13
16
6
63
1.50
6615--6647
15
2.1
16
88
5
50
48
0
12
39
1.40
8981--9022
15
2.7
15
96
3
75
11
7
14
66
1.43

Tables:   1

The End!