Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01012440.1 Corchorus olitorius cultivar O-4 contig12473, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 44543
ACGTcount: A:0.34, C:0.17, G:0.17, T:0.33
Found at i:791 original size:15 final size:16
Alignment explanation
Indices: 761--798 Score: 60
Period size: 15 Copynumber: 2.4 Consensus size: 16
751 TTACTTTGCT
*
761 TTGTTTTCTAGTTTAA
1 TTGTTTTATAGTTTAA
777 TTGTTTTAT-GTTTAA
1 TTGTTTTATAGTTTAA
792 TTGTTTT
1 TTGTTTT
799 CTGTCAACCT
Statistics
Matches: 21, Mismatches: 1, Indels: 1
0.91 0.04 0.04
Matches are distributed among these distances:
15 13 0.62
16 8 0.38
ACGTcount: A:0.16, C:0.03, G:0.13, T:0.68
Consensus pattern (16 bp):
TTGTTTTATAGTTTAA
Found at i:1360 original size:12 final size:13
Alignment explanation
Indices: 1328--1360 Score: 50
Period size: 13 Copynumber: 2.6 Consensus size: 13
1318 AATAACCCTC
*
1328 ACTCAATCTTACA
1 ACTCAATCTAACA
1341 ACTCAATCTAACA
1 ACTCAATCTAACA
1354 A-TCAATC
1 ACTCAATC
1361 ATAAATCAAA
Statistics
Matches: 19, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
12 6 0.32
13 13 0.68
ACGTcount: A:0.42, C:0.30, G:0.00, T:0.27
Consensus pattern (13 bp):
ACTCAATCTAACA
Found at i:1459 original size:2 final size:2
Alignment explanation
Indices: 1452--1490 Score: 69
Period size: 2 Copynumber: 19.5 Consensus size: 2
1442 ACTAAACAAT
*
1452 CA CA CA CA CA CA CA CA CC CA CA CA CA CA CA CA CA CA CA C
1 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA C
1491 CATCCTCTTG
Statistics
Matches: 35, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
2 35 1.00
ACGTcount: A:0.46, C:0.54, G:0.00, T:0.00
Consensus pattern (2 bp):
CA
Found at i:3060 original size:20 final size:20
Alignment explanation
Indices: 3035--3079 Score: 81
Period size: 20 Copynumber: 2.2 Consensus size: 20
3025 CCCATGTTAA
*
3035 GTAAAATTGGGGGTAGTATT
1 GTAAAATTGAGGGTAGTATT
3055 GTAAAATTGAGGGTAGTATT
1 GTAAAATTGAGGGTAGTATT
3075 GTAAA
1 GTAAA
3080 GTATAGTAAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
20 24 1.00
ACGTcount: A:0.36, C:0.00, G:0.31, T:0.33
Consensus pattern (20 bp):
GTAAAATTGAGGGTAGTATT
Found at i:5659 original size:25 final size:25
Alignment explanation
Indices: 5631--5846 Score: 283
Period size: 25 Copynumber: 8.6 Consensus size: 25
5621 CGCTCATGTT
* *
5631 CTTGTGTTTGGAAAACGAGCCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
5656 CTTGCGTTTGGAAAACGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
5681 CTTGCGTTTGGAAAACGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
5706 CTTGCGTTTGGAAAACGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
* * * *
5731 CATGCGTTTGGCAAGCGAGCCT-TAG
1 CTTGCGTTTGGAAAACGAACCTGT-G
*
5756 CTTGCGTTTTGAAAACGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
* *
5781 CTTGCGTTTGGCAAGCGAACCT-TAG
1 CTTGCGTTTGGAAAACGAACCTGT-G
* * *
5806 CTTGCGTTTAGCAAACGAGCCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
*
5831 CTTGCGTTTAGAAAAC
1 CTTGCGTTTGGAAAAC
5847 ACATAGGCTA
Statistics
Matches: 169, Mismatches: 18, Indels: 8
0.87 0.09 0.04
Matches are distributed among these distances:
24 2 0.01
25 165 0.98
26 2 0.01
ACGTcount: A:0.23, C:0.21, G:0.28, T:0.29
Consensus pattern (25 bp):
CTTGCGTTTGGAAAACGAACCTGTG
Found at i:8500 original size:15 final size:15
Alignment explanation
Indices: 8480--8535 Score: 67
Period size: 15 Copynumber: 3.5 Consensus size: 15
8470 CACCAGATGA
8480 TGTTTCTGCAACGGT
1 TGTTTCTGCAACGGT
*
8495 TGTTTCTGAAACGGAT
1 TGTTTCTGCAACGG-T
*
8511 GATGTTTTTGCAACGGT
1 --TGTTTCTGCAACGGT
8528 TGTTTCTG
1 TGTTTCTG
8536 GAACAGTGCC
Statistics
Matches: 34, Mismatches: 4, Indels: 6
0.77 0.09 0.14
Matches are distributed among these distances:
15 20 0.59
16 1 0.03
17 1 0.03
18 12 0.35
ACGTcount: A:0.16, C:0.14, G:0.27, T:0.43
Consensus pattern (15 bp):
TGTTTCTGCAACGGT
Found at i:8525 original size:18 final size:18
Alignment explanation
Indices: 8464--8526 Score: 69
Period size: 18 Copynumber: 3.7 Consensus size: 18
8454 CATTTGCAAT
* *
8464 TTTCTGCACCAGATGATG
1 TTTCTGCAACGGATGATG
8482 TTTCTGCAACGG-T--TG
1 TTTCTGCAACGGATGATG
*
8497 TTTCTGAAACGGATGATG
1 TTTCTGCAACGGATGATG
*
8515 TTTTTGCAACGG
1 TTTCTGCAACGG
8527 TTGTTTCTGG
Statistics
Matches: 37, Mismatches: 5, Indels: 6
0.77 0.10 0.12
Matches are distributed among these distances:
15 13 0.35
16 1 0.03
17 1 0.03
18 22 0.59
ACGTcount: A:0.21, C:0.17, G:0.25, T:0.37
Consensus pattern (18 bp):
TTTCTGCAACGGATGATG
Found at i:8643 original size:27 final size:27
Alignment explanation
Indices: 8605--8715 Score: 186
Period size: 27 Copynumber: 4.1 Consensus size: 27
8595 GGCCATTCAA
* *
8605 TTGGGGTTGCGGATGAGGCACAGCCAC
1 TTGGGGTTGCGGATGAAGCGCAGCCAC
8632 TTGGGGTTGCGGATGAAGCGCAGCCAC
1 TTGGGGTTGCGGATGAAGCGCAGCCAC
* *
8659 CTGGGGTTGCGGATGAAGCGCAACCAC
1 TTGGGGTTGCGGATGAAGCGCAGCCAC
8686 TTGGGGTTGCGGATGAAGCGCAGCCAC
1 TTGGGGTTGCGGATGAAGCGCAGCCAC
8713 TTG
1 TTG
8716 AGGTGGCGCC
Statistics
Matches: 78, Mismatches: 6, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
27 78 1.00
ACGTcount: A:0.19, C:0.23, G:0.40, T:0.19
Consensus pattern (27 bp):
TTGGGGTTGCGGATGAAGCGCAGCCAC
Found at i:10212 original size:25 final size:25
Alignment explanation
Indices: 10178--10418 Score: 315
Period size: 25 Copynumber: 9.6 Consensus size: 25
10168 TGCTCATGTT
* *
10178 CTTGTGTTTGGAAAACGAGCCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
10203 CTTGCGTTTGGAAAACGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
10228 CTTGCGTTTGGAAAACGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
*
10253 CTTGCGTTTGGAAAGCGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
10278 CTTGCGTTTGGAAAACGAACCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
* * *
10303 CTTGCGTTTGGCAAGCGAGCCT-TAG
1 CTTGCGTTTGGAAAACGAACCTGT-G
* *
10328 CTTGCGTTTTGAAAACGAACTTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
* * *
10353 CTTGCGTTTGGCAAGCGAGCCT-TAG
1 CTTGCGTTTGGAAAACGAACCTGT-G
* * *
10378 CTTGCGTTTAGCAAACGAGCCTGTG
1 CTTGCGTTTGGAAAACGAACCTGTG
*
10403 CTTGCGTTTAGAAAAC
1 CTTGCGTTTGGAAAAC
10419 ACATAGGCTA
Statistics
Matches: 192, Mismatches: 20, Indels: 8
0.87 0.09 0.04
Matches are distributed among these distances:
24 2 0.01
25 188 0.98
26 2 0.01
ACGTcount: A:0.22, C:0.20, G:0.29, T:0.29
Consensus pattern (25 bp):
CTTGCGTTTGGAAAACGAACCTGTG
Found at i:15511 original size:188 final size:181
Alignment explanation
Indices: 15043--15523 Score: 520
Period size: 198 Copynumber: 2.6 Consensus size: 181
15033 GTGGATAATC
* * * *
15043 GAGGCAAGTGAGTGTTATTTTGATCCTTTAATCTCAGTCGTTTAAAGCTAATCTTAATATATAGG
1 GAGGCAAGTGAGGGTTATCTTGATCCTTCAATCTCAGTCGTTTAAAGGTAATCTTAATATATAGG
* * * * * *
15108 TGTCAAGAATCAGGGACTATATTGGAAATGATTT--TATAAGGTATATTGGAGGGGAGTTGTACT
66 AGTCAAGAATCCGAGACTATATTGGAAATGATTTGATATAAGGTATATTGGAGAGGAGTTGGACC
** * * * * ** *
15171 TGTCAAAGAACAAGATGAGAAGAGTAAGGGAAGGAAAGGGTGTGGATAACT
131 CATCAAAAAACAAGAAGAGAAAAGTAAGGGAAGGAAACGGCATGAATAACT
* * * *
15222 AAGGCAAGTGAGGGTTATCTTGATCCTTTAGTCTTTTAATCTTAGCCATTTAAAGGTAATCTTAA
1 GAGGCAAGTGAGGGTTATCTTGATCC--T--TC----AATCTCAGTCGTTTAAAGGTAATCTTAA
* *
15287 TATATAGGTTGGTCAAGAATCCGAGACTATATTGGAAATGATTTGATATAAGGTTTATTGGAGAG
58 TATATAGG--AGTCAAGAATCCGAGACTATATTGGAAATGATTTGATATAAGGTATATTGGAGAG
15352 GAGTTGGACCCAT-AAAAAACAAGTTAAAGAAGGTGACAAAGTGAA-GGAAGGAAACGGCATGAA
121 GAGTTGGACCCATCAAAAAACAAG---AAG-A---GA-AAAGT-AAGGGAAGGAAACGGCATGAA
15415 TAACT
177 TAACT
*
15420 GAGGCAATTGAGGGTTATCTTGATCCTTCAATCTCAGTCGTTTAAAGGTAATCTTAATATATAGG
1 GAGGCAAGTGAGGGTTATCTTGATCCTTCAATCTCAGTCGTTTAAAGGTAATCTTAATATATAGG
*
15485 AGTCAAGAATCCCAGACTATATTGGAAATGATTTGATAT
66 AGTCAAGAATCCGAGACTATATTGGAAATGATTTGATAT
15524 GTGTATCGGA
Statistics
Matches: 250, Mismatches: 31, Indels: 33
0.80 0.10 0.11
Matches are distributed among these distances:
179 23 0.09
181 1 0.00
183 1 0.00
187 32 0.13
188 37 0.15
189 31 0.12
190 42 0.17
191 26 0.10
193 2 0.01
194 3 0.01
196 1 0.00
197 2 0.01
198 47 0.19
199 2 0.01
ACGTcount: A:0.35, C:0.10, G:0.24, T:0.30
Consensus pattern (181 bp):
GAGGCAAGTGAGGGTTATCTTGATCCTTCAATCTCAGTCGTTTAAAGGTAATCTTAATATATAGG
AGTCAAGAATCCGAGACTATATTGGAAATGATTTGATATAAGGTATATTGGAGAGGAGTTGGACC
CATCAAAAAACAAGAAGAGAAAAGTAAGGGAAGGAAACGGCATGAATAACT
Found at i:15602 original size:3 final size:3
Alignment explanation
Indices: 15594--15674 Score: 137
Period size: 3 Copynumber: 27.0 Consensus size: 3
15584 AATCAACATT
15594 ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA
1 ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA
*
15642 ATA ATA ATA ATA ATA ATA TTA AT- ATA TATA ATA
1 ATA ATA ATA ATA ATA ATA ATA ATA ATA -ATA ATA
15675 TCTAATTAGA
Statistics
Matches: 74, Mismatches: 2, Indels: 4
0.93 0.03 0.05
Matches are distributed among these distances:
2 2 0.03
3 69 0.93
4 3 0.04
ACGTcount: A:0.64, C:0.00, G:0.00, T:0.36
Consensus pattern (3 bp):
ATA
Found at i:15687 original size:15 final size:15
Alignment explanation
Indices: 15594--15688 Score: 65
Period size: 15 Copynumber: 6.3 Consensus size: 15
15584 AATCAACATT
*
15594 ATAATAATAATAATA-
1 ATAATATTAAT-ATAG
*
15609 ATAATAATAATAATA-
1 ATAATATTAAT-ATAG
*
15624 ATAATAATAATAATA-
1 ATAATATTAAT-ATAG
*
15639 ATAATAATAATAATA-
1 ATAATATTAAT-ATAG
*
15654 ATAATATTAATATAT
1 ATAATATTAATATAG
15669 ATAATATCTAAT-TAG
1 ATAATAT-TAATATAG
15684 ATAAT
1 ATAAT
15689 GTAAAATACA
Statistics
Matches: 76, Mismatches: 2, Indels: 4
0.93 0.02 0.05
Matches are distributed among these distances:
14 3 0.04
15 69 0.91
16 4 0.05
ACGTcount: A:0.61, C:0.01, G:0.01, T:0.37
Consensus pattern (15 bp):
ATAATATTAATATAG
Found at i:16404 original size:6 final size:6
Alignment explanation
Indices: 16393--16423 Score: 62
Period size: 6 Copynumber: 5.2 Consensus size: 6
16383 CATCTTCTGC
16393 TGCTGT TGCTGT TGCTGT TGCTGT TGCTGT T
1 TGCTGT TGCTGT TGCTGT TGCTGT TGCTGT T
16424 ACCCCTCAGG
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 25 1.00
ACGTcount: A:0.00, C:0.16, G:0.32, T:0.52
Consensus pattern (6 bp):
TGCTGT
Found at i:18214 original size:30 final size:28
Alignment explanation
Indices: 18145--18215 Score: 74
Period size: 27 Copynumber: 2.5 Consensus size: 28
18135 AAAATGTTAT
*
18145 TGTGATTAAAATTCTACTAAAAAGA-TA
1 TGTGATTATAATTCTACTAAAAAGATTA
* *
18172 T-TAGAATATAATTCTACTAGAAAGAATTA
1 TGT-GATTATAATTCTACTAAAAAG-ATTA
18201 TAGTGATTATAATTC
1 T-GTGATTATAATTC
18216 AATATTTTTA
Statistics
Matches: 35, Mismatches: 4, Indels: 7
0.76 0.09 0.15
Matches are distributed among these distances:
26 1 0.03
27 19 0.54
28 1 0.03
29 3 0.09
30 10 0.29
31 1 0.03
ACGTcount: A:0.45, C:0.07, G:0.11, T:0.37
Consensus pattern (28 bp):
TGTGATTATAATTCTACTAAAAAGATTA
Found at i:20277 original size:128 final size:128
Alignment explanation
Indices: 20114--20370 Score: 360
Period size: 128 Copynumber: 2.0 Consensus size: 128
20104 ACTTGGTTAA
*
20114 TTACTAAGAAGGCCCTCAATTAGTTTCTCAACATT-CTCTTCTCCTCCAGCCCTTTTT-AGTAAT
1 TTACTAAGAAGGCCATCAATTAGTTTCTCAACATTCCT-TTCTCCTCC-GCCCTTTTTCAGTAAT
* *
20177 TGCAAAGGTTTTTAACCAGTTGAATGTGAAAGC-C-TTTATTGACCATAAAATCATGTATTATTT
64 TACAAAGGTTTTTAACCAGTTCAATGT-AAA-CACATTTATTGACCATAAAATCATGTATTATTT
20240 AT
127 AT
* * * * **
20242 TTACTAAGAAGGCCATCAATTAGTTTCTCACCATTCCTTTTTCTTCCGGCCTTTTTCTTTAATTA
1 TTACTAAGAAGGCCATCAATTAGTTTCTCAACATTCCTTTCTCCTCCGCCCTTTTTCAGTAATTA
*
20307 CAAGGGTTTTTAACCAGTTCAATGTAAACACATTTATTGACCATAAAATCATGTATTATTTAT
66 CAAAGGTTTTTAACCAGTTCAATGTAAACACATTTATTGACCATAAAATCATGTATTATTTAT
20370 T
1 T
20371 CACTTCATCC
Statistics
Matches: 115, Mismatches: 10, Indels: 8
0.86 0.08 0.06
Matches are distributed among these distances:
126 1 0.01
127 12 0.10
128 100 0.87
129 2 0.02
ACGTcount: A:0.29, C:0.20, G:0.11, T:0.40
Consensus pattern (128 bp):
TTACTAAGAAGGCCATCAATTAGTTTCTCAACATTCCTTTCTCCTCCGCCCTTTTTCAGTAATTA
CAAAGGTTTTTAACCAGTTCAATGTAAACACATTTATTGACCATAAAATCATGTATTATTTAT
Found at i:21398 original size:21 final size:23
Alignment explanation
Indices: 21374--21429 Score: 57
Period size: 21 Copynumber: 2.6 Consensus size: 23
21364 CATAGTATTA
21374 AAATTATTATATAATA-AT-AAC
1 AAATTATTATATAATATATAAAC
* *
21395 AAATT-TT-TTTAATATTATAAAT
1 AAATTATTATATAATA-TATAAAC
21417 AAATTATTATATA
1 AAATTATTATATA
21430 TGTGATAACT
Statistics
Matches: 27, Mismatches: 3, Indels: 7
0.73 0.08 0.19
Matches are distributed among these distances:
19 6 0.22
20 2 0.07
21 7 0.26
22 7 0.26
23 2 0.07
24 3 0.11
ACGTcount: A:0.52, C:0.02, G:0.00, T:0.46
Consensus pattern (23 bp):
AAATTATTATATAATATATAAAC
Found at i:25650 original size:22 final size:22
Alignment explanation
Indices: 25625--25667 Score: 59
Period size: 22 Copynumber: 2.0 Consensus size: 22
25615 TTTTATTTGA
*
25625 GTAAAACTATAAAAGTAAAATT
1 GTAAAACTATAAAAATAAAATT
* *
25647 GTAAAATTGTAAAAATAAAAT
1 GTAAAACTATAAAAATAAAAT
25668 AGTTATAAGG
Statistics
Matches: 18, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
22 18 1.00
ACGTcount: A:0.60, C:0.02, G:0.09, T:0.28
Consensus pattern (22 bp):
GTAAAACTATAAAAATAAAATT
Found at i:25723 original size:93 final size:93
Alignment explanation
Indices: 25563--25731 Score: 284
Period size: 93 Copynumber: 1.8 Consensus size: 93
25553 AGTATTATCT
* *
25563 TAAAAATAAAATAGGTATAAGGATATTAGATTTAATTAAATAAAAATAGAGTTTTTATTTGAGTA
1 TAAAAATAAAATAGGTATAAGGATATTAGATTTAATTAAATAAAAATAGAGTTTTCAGTTGAGTA
*
25628 AAACTATAAAAGTAAAATTGTAAAATTG
66 AAACAATAAAAGTAAAATTGTAAAATTG
* * *
25656 TAAAAATAAAATAGTTATAAGGATATTAGATTTAATTAAATCAAAATAGAGTTTTCAGTTGATTA
1 TAAAAATAAAATAGGTATAAGGATATTAGATTTAATTAAATAAAAATAGAGTTTTCAGTTGAGTA
25721 AAACAATAAAA
66 AAACAATAAAA
25732 ATTTAAATAA
Statistics
Matches: 70, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
93 70 1.00
ACGTcount: A:0.52, C:0.02, G:0.12, T:0.34
Consensus pattern (93 bp):
TAAAAATAAAATAGGTATAAGGATATTAGATTTAATTAAATAAAAATAGAGTTTTCAGTTGAGTA
AAACAATAAAAGTAAAATTGTAAAATTG
Found at i:25805 original size:31 final size:32
Alignment explanation
Indices: 25767--25830 Score: 112
Period size: 31 Copynumber: 2.0 Consensus size: 32
25757 ATATTCAAAA
*
25767 AATAAGGGTATGATAGGCGATTCAAAA-GTTT
1 AATAAGGGTATAATAGGCGATTCAAAAGGTTT
25798 AATAAGGGTATAATAGGCGATTCAAAAGGTTT
1 AATAAGGGTATAATAGGCGATTCAAAAGGTTT
25830 A
1 A
25831 CAAAACTCGT
Statistics
Matches: 31, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
31 26 0.84
32 5 0.16
ACGTcount: A:0.41, C:0.06, G:0.25, T:0.28
Consensus pattern (32 bp):
AATAAGGGTATAATAGGCGATTCAAAAGGTTT
Found at i:27221 original size:32 final size:32
Alignment explanation
Indices: 27180--27240 Score: 104
Period size: 32 Copynumber: 1.9 Consensus size: 32
27170 AAATATGTTT
*
27180 GAAAAATAAGAGTATAATGGTCGATTCAATTA
1 GAAAAATAAGAGTATAATAGTCGATTCAATTA
*
27212 GAAAAATAAGGGTATAATAGTCGATTCAA
1 GAAAAATAAGAGTATAATAGTCGATTCAA
27241 AAGTTTTACA
Statistics
Matches: 27, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
32 27 1.00
ACGTcount: A:0.48, C:0.07, G:0.20, T:0.26
Consensus pattern (32 bp):
GAAAAATAAGAGTATAATAGTCGATTCAATTA
Found at i:28664 original size:2 final size:2
Alignment explanation
Indices: 28657--28696 Score: 73
Period size: 2 Copynumber: 20.5 Consensus size: 2
28647 TAATATTTAG
28657 TA TA TA TA TA TA TA T- TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
28697 TTTGTTCTAT
Statistics
Matches: 37, Mismatches: 0, Indels: 2
0.95 0.00 0.05
Matches are distributed among these distances:
1 1 0.03
2 36 0.97
ACGTcount: A:0.47, C:0.00, G:0.00, T:0.53
Consensus pattern (2 bp):
TA
Done.