Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012441.1 Corchorus olitorius cultivar O-4 contig12474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29147

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
682--959
139
2.0
139
96
0
511
37
18
12
31
1.88
942--1238
147
2.0
147
100
0
594
28
21
15
34
1.94
14726--14816
44
2.0
46
95
4
168
41
10
10
36
1.76
14746--14826
22
3.6
22
67
23
69
44
9
8
37
1.69
19341--19374
4
9.0
4
87
12
54
73
0
0
26
0.83
19344--19377
14
2.4
14
95
0
59
73
0
0
26
0.83
22161--22186
13
2.0
13
100
0
52
38
0
0
61
0.96
27085--27138
2
29.5
2
78
17
64
48
0
0
51
1.00
27085--27138
11
4.9
12
76
19
64
48
0
0
51
1.00
27085--27150
16
4.2
15
77
11
53
51
0
0
48
1.00

Tables:   1

The End!