Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012443.1 Corchorus olitorius cultivar O-4 contig12476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27985

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--44
2
22.0
2
100
0
88
50
0
0
50
1.00
13089--13230
49
3.0
47
82
9
169
50
5
16
27
1.67
27292--27397
16
6.6
16
76
8
117
8
15
39
36
1.77
27312--27397
32
2.7
32
94
0
145
8
15
39
37
1.77
27386--27428
6
7.3
6
81
5
52
4
16
46
32
1.67
27371--27433
23
2.8
23
78
7
76
6
14
42
36
1.71
27553--27599
13
3.8
12
78
13
51
55
4
0
40
1.19
27853--27924
31
2.3
31
75
17
78
61
8
4
26
1.43

Tables:   1

The End!