Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012444.1 Corchorus olitorius cultivar O-4 contig12477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8409

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117--143
2
13.5
2
100
0
54
48
0
0
51
1.00
195--252
26
2.4
22
76
21
53
41
1
1
55
1.20
313--360
6
8.2
6
83
4
53
2
29
45
22
1.64
3004--3053
25
1.9
26
92
8
84
8
12
4
76
1.15

Tables:   1

The End!