Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012448.1 Corchorus olitorius cultivar O-4 contig12481, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15164

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--84
33
2.5
32
84
10
92
30
13
21
35
1.92
343--643
159
1.9
158
82
6
385
29
17
20
32
1.96
7870--7905
13
2.8
13
91
0
54
52
16
8
22
1.70
9108--9142
13
2.8
12
87
8
52
2
25
0
71
1.00
9250--9306
25
2.2
26
80
17
66
14
38
40
7
1.73
11072--11179
54
2.0
54
100
0
216
35
7
9
48
1.63
14881--15031
50
3.0
50
99
0
293
23
19
27
29
1.98

Tables:   1

The End!