Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012449.1 Corchorus olitorius cultivar O-4 contig12482, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6175

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
251--332
31
2.6
31
92
5
139
37
14
9
37
1.79
2700--2731
12
2.5
13
90
10
57
37
0
21
40
1.54
3818--3874
23
2.6
21
89
10
96
50
0
0
49
1.00
4006--4044
17
2.3
17
91
8
62
2
12
0
84
0.72
4357--4400
23
1.9
23
100
0
88
43
40
4
11
1.61
5003--5177
75
2.3
75
76
3
174
38
17
14
29
1.90

Tables:   1

The End!