Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012450.1 Corchorus olitorius cultivar O-4 contig12483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14912

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
714--764
17
3.1
16
86
8
66
21
21
21
35
1.96
1452--1479
10
2.8
10
100
0
56
7
50
0
42
1.30
2751--3273
30
17.7
30
88
4
652
30
20
21
28
1.98
3056--3098
21
2.0
21
95
0
77
18
23
27
30
1.98
3026--3128
51
2.0
51
92
0
170
26
21
23
29
1.99
2966--3181
111
1.9
111
88
0
324
29
21
21
27
1.98
2936--3211
141
2.0
141
86
1
383
29
20
22
27
1.98
3188--3395
65
3.4
63
84
10
249
35
15
14
34
1.88
3292--3395
55
1.9
55
97
0
199
34
13
14
37
1.85

Tables:   1

The End!