Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012454.1 Corchorus olitorius cultivar O-4 contig12487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17230

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14275--14323
22
2.2
22
85
7
64
28
14
4
53
1.59
14296--14827
22
24.3
22
69
14
187
37
16
8
37
1.80
14906--15302
22
17.9
22
71
13
242
34
16
8
40
1.80
14881--15047
88
1.9
88
82
2
210
33
14
9
42
1.78
15337--15394
22
2.5
22
73
15
55
37
17
5
39
1.72
15398--15469
35
2.1
35
84
5
92
40
22
9
27
1.85
15446--15503
22
2.6
22
78
5
64
37
17
8
36
1.80
15694--15732
20
2.0
20
90
10
62
66
2
5
25
1.25

Tables:   1

The End!