Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012456.1 Corchorus olitorius cultivar O-4 contig12489, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10375

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5412--5483
34
2.1
34
100
0
144
40
29
15
15
1.88
5511--5589
33
2.5
33
82
11
105
30
16
6
46
1.72
5511--5589
28
2.6
30
84
9
99
30
16
6
46
1.72
5737--5998
131
2.0
129
86
6
368
37
9
1
51
1.46
7705--7766
31
2.0
31
93
0
106
29
22
6
41
1.78
7802--7985
92
2.0
93
91
1
298
32
13
2
52
1.52
8689--8743
25
2.2
24
80
6
56
27
5
3
63
1.33

Tables:   1

The End!