Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012458.1 Corchorus olitorius cultivar O-4 contig12491, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10738

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7537--7597
27
2.2
28
83
11
74
45
8
0
45
1.33
8947--9177
22
10.5
22
71
7
121
41
9
13
35
1.77
8990--9177
44
4.2
44
75
8
175
43
9
11
35
1.74
9012--9178
88
1.9
88
86
4
239
42
9
12
35
1.76
9193--9509
22
15.0
21
68
15
154
39
8
15
36
1.78
9227--9509
66
4.4
66
75
12
200
39
8
15
36
1.78
9425--9504
23
3.5
23
86
5
101
42
5
13
38
1.66
9557--9616
22
2.7
22
75
12
59
31
11
16
40
1.85
9679--9724
22
2.1
22
87
0
65
52
4
10
32
1.56
9903--9938
2
18.0
2
100
0
72
50
0
0
50
1.00
10481--10586
48
2.2
48
76
3
106
21
20
18
38
1.93
10535--10617
37
2.2
39
84
4
116
15
20
24
39
1.91

Tables:   1

The End!