Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012459.1 Corchorus olitorius cultivar O-4 contig12492, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3743

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1199--1365
48
3.5
48
79
3
167
17
18
21
41
1.90
1305--1483
94
1.9
93
81
10
213
17
20
23
38
1.93
2725--2833
21
5.2
21
62
16
64
49
14
6
29
1.68
2712--2834
42
2.9
42
98
0
237
47
15
7
30
1.73
3085--3344
108
2.4
107
88
5
366
40
8
8
42
1.66
3706--3743
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!