Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012461.1 Corchorus olitorius cultivar O-4 contig12494, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49526

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1359--1499
49
2.9
47
77
11
151
29
16
4
50
1.64
10852--10908
27
2.1
27
96
0
105
15
29
28
26
1.96
23963--24009
20
2.3
20
89
7
69
51
2
2
44
1.25
23961--24014
18
3.0
18
82
12
67
51
3
1
42
1.30
28418--28472
28
2.0
28
100
0
110
25
18
12
43
1.85
29391--29524
27
5.2
27
79
10
145
32
35
5
25
1.80
29447--29524
21
3.4
21
89
10
102
30
38
5
25
1.78
29429--29524
48
2.0
48
85
4
131
33
36
5
25
1.78
37069--37171
45
2.3
45
98
0
197
34
34
19
10
1.86
38891--38925
14
2.5
14
85
0
52
11
22
22
42
1.85
39815--40090
129
2.2
126
83
2
336
31
34
21
12
1.90
39815--40090
63
4.3
63
85
2
327
31
34
21
12
1.90
41830--43588
668
2.6
669
96
1
3245
43
17
13
26
1.85

Tables:   1

The End!