Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012468.1 Corchorus olitorius cultivar O-4 contig12501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44657

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9137--9196
19
3.3
19
65
21
56
33
10
23
33
1.88
9134--9207
35
2.1
35
100
0
148
36
8
18
36
1.81
20875--20912
14
2.5
16
83
8
53
36
5
15
42
1.70
23645--23691
2
23.0
2
84
4
58
44
0
6
48
1.28
27513--27668
39
4.0
39
83
1
179
37
17
21
23
1.94
27790--27825
5
6.8
5
87
12
54
0
22
0
77
0.76
27792--27823
11
2.9
11
100
0
64
0
25
0
75
0.81
28216--28255
15
2.6
16
84
8
55
60
12
10
17
1.59
29625--29684
29
2.0
31
87
6
88
36
18
6
38
1.77
29654--29684
11
2.7
12
95
5
55
38
19
6
35
1.77
31480--31518
21
1.9
21
89
5
62
20
17
41
20
1.91

Tables:   1

The End!