Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012469.1 Corchorus olitorius cultivar O-4 contig12502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7004

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4552--4601
21
2.4
21
82
0
55
26
2
18
54
1.54
4573--4624
7
7.4
7
91
0
77
26
0
17
55
1.42
4760--4837
33
2.4
33
88
0
111
33
6
16
43
1.74
4900--5445
54
10.3
54
85
6
683
35
21
15
27
1.93
5427--5461
17
2.1
17
100
0
70
37
28
22
11
1.89
5587--6265
111
6.1
111
79
6
597
45
14
16
23
1.84
5774--6288
74
7.0
74
85
3
592
44
14
16
24
1.85
5583--6291
37
19.1
37
77
7
537
45
14
16
23
1.84
6911--6939
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!