Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012474.1 Corchorus olitorius cultivar O-4 contig12507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5222

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--54
2
26.5
2
100
0
106
0
49
0
50
1.00
54--101
2
24.0
2
95
0
87
50
2
0
47
1.12
1578--1658
22
3.7
21
73
14
74
38
8
8
44
1.66
1550--1702
44
3.5
44
78
8
134
40
9
11
39
1.73
1643--1703
22
2.8
22
79
0
77
44
11
8
36
1.71
4212--4256
14
3.1
15
83
6
56
48
2
15
33
1.57
4477--4516
17
2.4
17
87
8
55
37
20
20
22
1.94
4739--4844
54
2.0
54
96
0
194
35
10
15
38
1.81

Tables:   1

The End!