Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012481.1 Corchorus olitorius cultivar O-4 contig12514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41965

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2752--2790
7
5.9
7
85
8
55
28
2
0
69
1.02
3880--3914
11
3.2
11
95
0
61
40
8
17
34
1.80
3944--3976
16
1.9
17
88
11
50
45
0
12
42
1.41
13381--13420
7
5.9
7
86
13
57
27
0
2
70
1.01
14582--14615
17
1.9
18
88
5
52
47
0
11
41
1.40
15024--15725
348
2.0
348
98
0
1359
29
10
16
43
1.81
20836--20871
19
1.9
18
88
5
54
33
22
2
41
1.68
37111--37207
5
18.8
5
75
14
74
2
19
1
77
0.93
37107--37204
21
5.1
19
69
20
69
2
21
1
75
0.96
37135--37192
22
2.8
20
80
12
64
1
20
0
77
0.86
37147--37214
22
3.1
21
82
2
64
2
16
0
80
0.82
37183--37216
15
2.3
15
94
0
59
2
8
0
88
0.62
37142--37215
21
3.2
22
73
19
62
2
16
0
81
0.81

Tables:   1

The End!