Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012483.1 Corchorus olitorius cultivar O-4 contig12516, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24514

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
607--1646
40
26.3
39
87
4
1303
38
9
20
32
1.85
1783--2294
139
3.6
142
92
3
824
33
16
20
29
1.95
1783--2294
282
1.8
279
91
4
848
33
16
20
29
1.95
10099--10160
25
2.4
25
83
2
79
17
20
11
50
1.77
12676--12724
25
2.0
25
100
0
98
34
20
32
12
1.90
13026--13062
19
1.9
19
100
0
74
18
10
27
43
1.83
13563--13611
25
2.0
25
95
0
89
36
18
32
12
1.88
13679--14010
165
2.0
165
98
0
637
20
13
22
43
1.86
20179--20218
19
2.1
18
86
9
53
72
15
10
2
1.21
24396--24502
33
3.2
33
95
0
187
8
32
42
16
1.79

Tables:   1

The End!