Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012491.1 Corchorus olitorius cultivar O-4 contig12524, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14421

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1182--1245
31
2.1
31
84
0
83
26
21
10
40
1.86
1285--1469
93
2.0
93
93
0
316
32
13
2
51
1.53
7110--7185
37
2.1
37
95
5
136
30
11
19
38
1.88
10829--10859
12
2.6
12
94
0
53
54
25
12
6
1.62
13247--13278
11
2.8
12
86
13
50
37
6
18
37
1.76
13259--13294
19
1.9
18
88
5
54
41
5
22
30
1.76

Tables:   1

The End!