Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012492.1 Corchorus olitorius cultivar O-4 contig12525, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22645

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3772--3850
38
2.1
38
92
4
133
34
27
11
26
1.91
5323--5399
33
2.4
32
89
6
111
49
2
25
22
1.63
5323--5399
32
2.4
33
89
6
113
49
2
25
22
1.63
6339--6380
22
1.9
22
90
0
66
14
19
26
40
1.89
12345--12619
139
2.0
139
97
0
514
33
29
15
21
1.94
13171--13199
7
4.1
7
100
0
58
13
31
13
41
1.84
21887--21940
12
4.5
12
83
0
63
35
0
14
50
1.44
22615--22644
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!