Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012494.1 Corchorus olitorius cultivar O-4 contig12527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40522

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11424--11459
17
2.1
17
89
5
54
50
11
16
22
1.77
22781--22816
18
2.0
18
89
10
56
61
2
13
22
1.46
26560--26653
45
2.2
43
88
7
138
39
22
4
34
1.74
31797--31822
1
26.0
1
100
0
52
0
0
100
0
0.00
36935--36978
20
2.2
20
95
0
79
45
11
0
43
1.40
38926--38987
31
2.0
31
93
0
106
29
22
6
41
1.78
39021--39191
85
2.1
80
84
9
236
32
11
2
53
1.50
39039--39201
85
1.9
85
92
2
274
33
12
1
52
1.50

Tables:   1

The End!