Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012500.1 Corchorus olitorius cultivar O-4 contig12533, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23435

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3529--3584
20
2.8
20
97
0
103
19
28
30
21
1.98
3883--3928
23
2.0
24
91
4
76
34
28
0
36
1.58
5788--5834
23
2.0
23
100
0
94
51
21
8
19
1.73
8357--8404
16
2.8
18
75
15
57
45
2
2
50
1.25
9595--9717
32
3.8
32
92
0
201
37
34
4
23
1.74
9615--9671
20
3.2
20
64
35
58
35
35
3
26
1.74
10682--10748
2
34.0
2
84
3
91
44
1
4
49
1.31
15248--15275
14
2.0
14
100
0
56
35
21
7
35
1.81

Tables:   1

The End!