Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012501.1 Corchorus olitorius cultivar O-4 contig12534, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28760

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4937--5090
21
7.4
21
93
2
217
29
17
26
26
1.98
9140--9175
19
1.9
18
88
5
54
27
22
8
41
1.82
10920--10966
22
2.2
21
84
3
58
27
19
6
46
1.74
17777--17856
29
2.6
31
84
5
101
48
10
15
26
1.75
18562--18616
27
2.1
25
90
10
83
49
23
9
18
1.76
19464--19499
2
18.5
2
94
5
65
50
0
0
50
1.00
19637--19701
32
2.0
32
88
5
96
32
3
23
41
1.70
22176--22212
15
2.4
16
90
4
58
54
0
0
45
1.00
25311--25353
16
2.9
15
80
19
54
34
34
23
6
1.82
27415--27473
30
2.0
30
93
6
102
18
35
18
27
1.94

Tables:   1

The End!