Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012503.1 Corchorus olitorius cultivar O-4 contig12536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37574

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17610--17636
2
13.5
2
100
0
54
48
0
0
51
1.00
25214--25265
26
2.0
25
92
3
86
26
9
9
53
1.64
25772--25808
19
1.9
19
88
0
56
16
27
13
43
1.85
25858--25897
21
1.9
21
94
0
71
35
20
10
35
1.86
27466--28143
338
2.0
338
96
1
1252
36
11
19
32
1.88
28050--28171
62
1.9
64
90
3
194
27
11
29
31
1.92
28952--30517
328
4.8
328
79
7
1422
34
13
14
37
1.86
29989--30558
313
1.8
314
85
3
808
33
13
16
36
1.88
31063--32074
333
3.1
330
77
10
907
33
13
15
37
1.86
31585--32639
541
2.0
533
82
6
1232
33
14
15
36
1.88
34898--34938
21
2.0
21
95
0
73
41
0
21
36
1.54
36820--36900
39
2.0
40
92
2
137
50
8
3
37
1.51
37017--37413
204
1.9
202
92
3
670
35
10
8
45
1.70

Tables:   1

The End!