Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012504.1 Corchorus olitorius cultivar O-4 contig12537, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44437

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12515--12539
1
25.0
1
100
0
50
0
0
0
100
0.00
22529--22554
6
4.3
6
100
0
52
15
19
19
46
1.85
25556--25586
1
31.0
1
100
0
62
100
0
0
0
0.00
26265--26291
7
3.9
7
100
0
54
29
11
14
44
1.80
30230--30265
18
2.0
18
94
0
63
47
11
19
22
1.80
31277--31308
2
16.0
2
100
0
64
50
0
0
50
1.00
32234--32350
44
2.6
45
83
5
155
35
11
11
41
1.76
32322--32517
97
2.0
99
90
4
308
36
16
12
34
1.86
40648--40684
12
3.5
11
86
13
51
37
2
0
59
1.12
42383--42412
6
5.0
6
91
0
51
63
16
3
16
1.44

Tables:   1

The End!