Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012507.1 Corchorus olitorius cultivar O-4 contig12540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31958

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--251
3
83.7
3
78
12
246
34
2
1
61
1.19
2110--2136
5
5.4
5
100
0
54
55
22
0
22
1.44
2180--2206
2
13.5
2
100
0
54
48
0
0
51
1.00
14123--14212
44
2.0
44
100
0
180
21
11
37
30
1.88
16521--16553
7
4.7
7
100
0
66
0
12
0
87
0.53
23174--23222
26
1.9
26
87
4
73
16
14
8
61
1.56
23717--23782
32
2.1
32
86
5
91
13
22
27
36
1.92
31281--31344
33
1.9
33
96
0
119
45
14
10
29
1.78

Tables:   1

The End!