Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012512.1 Corchorus olitorius cultivar O-4 contig12545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14292

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7418--7456
2
19.5
2
100
0
78
51
0
0
48
1.00
8338--8409
29
2.4
30
84
9
85
36
5
29
29
1.80
9487--10137
131
5.0
131
87
2
817
38
12
15
33
1.85
10811--10861
22
2.2
24
83
16
72
41
1
0
56
1.10
12530--12615
27
3.3
26
77
6
93
29
17
26
26
1.98
12743--12772
15
2.0
15
100
0
60
40
40
13
6
1.71

Tables:   1

The End!