Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012513.1 Corchorus olitorius cultivar O-4 contig12546, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32063

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3703--3732
3
10.0
3
100
0
60
0
66
0
33
0.92
13530--13565
7
5.1
7
100
0
72
27
58
0
13
1.36
14509--14546
2
19.5
2
94
5
69
50
0
0
50
1.00
15111--15135
10
2.5
10
100
0
50
80
8
12
0
0.92
15450--15530
39
2.0
40
90
2
128
49
9
3
37
1.54
15521--15567
25
1.9
24
95
4
85
29
6
8
55
1.55
15639--16051
204
2.0
205
97
1
778
35
11
9
43
1.72
19083--19117
6
5.8
6
100
0
70
34
48
17
0
1.47
22368--22508
72
2.0
72
97
0
264
23
17
14
45
1.84
25415--25471
4
14.2
4
100
0
114
26
0
24
49
1.51

Tables:   1

The End!