Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012515.1 Corchorus olitorius cultivar O-4 contig12548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7737

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
461--523
31
2.0
31
96
0
117
47
12
14
25
1.79
646--748
27
3.8
27
86
1
143
39
24
17
18
1.91
1249--1336
30
2.9
30
89
1
122
44
18
17
20
1.87
1556--1777
102
2.2
102
85
1
284
39
14
18
27
1.90
1658--2115
170
2.7
170
91
1
699
35
16
19
28
1.94
3527--3566
18
2.3
17
91
4
62
5
12
0
82
0.82
3868--3909
15
2.8
15
89
10
68
11
0
7
80
0.88
4286--4322
8
4.5
8
93
6
65
13
10
0
75
1.04
4736--4779
18
2.3
18
84
7
52
47
22
4
25
1.70
4747--4785
18
2.2
18
90
0
60
38
28
2
30
1.70

Tables:   1

The End!