Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012517.1 Corchorus olitorius cultivar O-4 contig12550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6366

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1298--1327
15
2.1
15
93
6
53
63
6
16
13
1.50
1685--1743
21
2.8
21
76
2
64
15
23
44
16
1.86
4816--4898
28
2.9
28
84
10
107
42
13
6
38
1.69
4912--4975
23
2.8
23
68
17
60
35
10
10
42
1.75
5347--5384
15
2.5
15
91
4
58
60
13
10
15
1.59

Tables:   1

The End!