Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012520.1 Corchorus olitorius cultivar O-4 contig12553, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10824

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1388--1461
29
2.5
31
86
4
98
48
12
16
22
1.79
1591--1732
31
4.6
31
80
4
135
33
16
11
38
1.85
1763--1795
16
2.0
17
94
5
59
51
0
0
48
1.00
1868--1898
16
1.9
16
100
0
62
48
0
19
32
1.49
2736--2815
31
2.6
31
83
0
106
40
6
17
36
1.75
2923--2989
31
2.2
31
92
5
111
20
19
11
47
1.81
4494--4526
14
2.4
14
94
0
57
39
0
18
42
1.50
10248--10276
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!