Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012521.1 Corchorus olitorius cultivar O-4 contig12554, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19477

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1042--1074
6
5.5
6
100
0
66
33
15
15
36
1.88
1702--1901
76
2.6
76
95
0
364
28
17
18
35
1.94
4863--4954
21
4.4
21
93
2
150
29
22
22
25
1.99
8668--8714
26
1.9
24
87
12
69
40
4
27
27
1.75
8897--9036
70
2.0
70
100
0
280
40
25
11
22
1.88
9658--9728
21
3.4
21
96
3
126
25
25
21
28
1.99
15237--15488
29
8.7
29
81
4
258
16
18
25
39
1.91
15236--15428
88
2.2
87
83
0
242
17
17
26
38
1.91

Tables:   1

The End!