Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012532.1 Corchorus olitorius cultivar O-4 contig12565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49027

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13844--13973
34
3.7
34
78
7
143
36
18
14
30
1.91
17207--17245
16
2.4
16
86
0
51
43
5
17
33
1.72
17198--17244
24
2.0
24
91
0
76
42
6
19
31
1.76
17156--17309
80
1.9
81
91
2
256
40
9
21
27
1.84
17543--17601
30
2.0
30
86
6
84
38
10
16
33
1.83
19148--19793
35
18.2
35
75
7
532
39
23
19
17
1.92
19245--19764
142
3.6
142
85
4
629
40
23
19
16
1.91
19178--19793
107
5.8
105
85
5
444
39
23
19
17
1.92
21026--21069
23
1.9
23
86
9
63
0
22
0
77
0.77
27559--27590
15
2.1
15
100
0
64
50
6
15
28
1.68
28706--28741
19
1.9
18
88
5
54
27
22
8
41
1.82
40221--40277
30
1.9
29
89
10
89
59
5
14
21
1.54

Tables:   1

The End!