Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012540.1 Corchorus olitorius cultivar O-4 contig12573, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28738

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8771--8802
2
16.0
2
100
0
64
0
0
50
50
1.00
12398--12445
2
24.5
2
87
4
71
52
45
2
0
1.12
12432--12488
3
18.3
3
96
3
96
64
35
0
0
0.93
17145--17171
14
1.9
14
100
0
54
29
40
0
29
1.57
18689--18734
22
2.1
22
95
0
83
43
13
43
0
1.43
21101--21533
216
2.0
216
97
0
814
48
6
9
36
1.60
22508--22557
19
2.6
19
87
0
82
20
34
12
34
1.89
24831--24867
18
2.1
18
100
0
74
27
21
10
40
1.86

Tables:   1

The End!