Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012541.1 Corchorus olitorius cultivar O-4 contig12574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28618

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3493--3792
75
4.0
75
91
0
465
31
29
17
21
1.96
10508--10574
32
2.1
32
83
5
82
50
14
13
20
1.77
13438--13538
53
1.9
53
97
0
193
42
25
13
17
1.87
14013--15073
435
2.4
431
81
5
1157
31
13
12
42
1.81
18291--18506
110
2.0
109
91
4
355
36
6
7
49
1.57
20190--20230
20
2.0
20
86
9
57
24
9
9
56
1.62

Tables:   1

The End!