Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012547.1 Corchorus olitorius cultivar O-4 contig12580, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16345

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1407--1632
22
10.3
21
70
12
105
39
10
14
35
1.80
1397--1499
44
2.3
45
83
6
122
37
11
15
34
1.84
1784--2040
66
3.9
66
78
4
234
33
10
16
39
1.84
1764--2041
22
12.7
22
74
5
204
32
11
17
39
1.85
5154--5193
20
1.9
21
85
10
55
10
17
0
72
1.11
16173--16273
50
2.0
49
83
9
125
21
23
13
40
1.89

Tables:   1

The End!