Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012548.1 Corchorus olitorius cultivar O-4 contig12581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14879

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7159--7187
15
2.0
15
93
6
51
58
27
0
13
1.36
8739--8798
17
3.2
20
68
18
56
38
6
16
38
1.75
14303--14363
23
2.7
23
82
7
72
29
14
3
52
1.58
14436--14626
76
2.5
76
85
4
244
42
21
12
22
1.86
14566--14624
20
2.8
20
79
5
64
47
23
8
20
1.77

Tables:   1

The End!