Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012549.1 Corchorus olitorius cultivar O-4 contig12582, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4262

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80--230
33
4.6
33
98
0
293
12
36
33
17
1.88
3816--3873
21
2.8
21
86
5
73
41
22
17
18
1.90
3761--4013
75
3.3
76
80
5
280
40
21
13
24
1.89
3891--3948
21
2.8
21
94
0
98
43
25
12
18
1.85
4040--4084
22
2.0
22
86
0
63
13
37
11
37
1.80

Tables:   1

The End!