Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012550.1 Corchorus olitorius cultivar O-4 contig12583, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17100

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
322--681
179
2.0
179
90
2
562
35
9
3
51
1.50
1129--1203
29
2.5
29
84
4
87
38
8
20
33
1.81
2034--2070
5
7.6
5
93
6
67
21
0
16
62
1.33
3765--3914
22
6.8
22
71
11
83
38
14
7
40
1.73
3758--3807
22
2.3
21
76
6
55
50
12
4
34
1.58
5949--6023
36
2.1
36
92
0
123
40
20
10
29
1.86
8105--8160
29
1.9
29
100
0
112
25
0
14
60
1.34
9745--9919
83
2.1
86
86
4
248
36
9
2
52
1.47
12984--13032
22
2.2
22
85
0
62
10
34
38
16
1.82
14216--14557
173
2.0
174
97
0
641
41
14
19
24
1.89
14884--14920
12
3.1
12
88
0
56
59
0
0
40
0.97
15136--15198
31
2.0
31
96
0
117
22
17
15
44
1.86

Tables:   1

The End!